MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
19428wF2_HT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 193
bases: 2,276,358 bps
CDS: 2,234
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,305
Total number of protein coding genes annotated/found:
2,234
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5023|JADGME010000010.1
SEQF5023_00021
Genome Viewer
NA
AA
1842/614
10528-12369
Fatty acid ABC transporter ATP-binding/permease protein
SEQF5023|JADGME010000010.1
SEQF5023_00022
Genome Viewer
NA
AA
903/301
13465-12563
Glycine betaine/carnitine transport binding protein GbuC
SEQF5023|JADGME010000010.1
SEQF5023_00023
Genome Viewer
NA
AA
837/279
14313-13477
Glycine betaine/carnitine transport permease protein GbuB
SEQF5023|JADGME010000010.1
SEQF5023_00024
Genome Viewer
NA
AA
1194/398
15506-14313
Glycine betaine/carnitine transport ATP-binding protein GbuA
SEQF5023|JADGME010000010.1
SEQF5023_00025
Genome Viewer
NA
AA
138/46
15935-15798
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00026
Genome Viewer
NA
AA
435/145
16095-16529
Acetyltransferase
SEQF5023|JADGME010000010.1
SEQF5023_00027
Genome Viewer
NA
AA
558/186
16799-17356
Protein LemA
SEQF5023|JADGME010000010.1
SEQF5023_00028
Genome Viewer
NA
AA
897/299
17368-18264
Protease HtpX
SEQF5023|JADGME010000010.1
SEQF5023_00029
Genome Viewer
NA
AA
1377/459
18391-19767
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
SEQF5023|JADGME010000010.1
SEQF5023_00030
Genome Viewer
NA
AA
1512/504
19910-21421
ATP-dependent RNA helicase CshA
SEQF5023|JADGME010000010.1
SEQF5023_00031
Genome Viewer
NA
AA
192/64
21512-21703
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00032
Genome Viewer
NA
AA
10071/3357
21940-32010
hypothetical protein
SEQF5023|JADGME010000010.1
SEQF5023_00033
Genome Viewer
NA
AA
1431/477
32266-33696
Cytochrome bd ubiquinol oxidase subunit 1
SEQF5023|JADGME010000010.1
SEQF5023_00034
Genome Viewer
NA
AA
1026/342
33697-34722
Cytochrome bd-I ubiquinol oxidase subunit 2
SEQF5023|JADGME010000010.1
SEQF5023_00035
Genome Viewer
NA
AA
1725/575
34722-36446
ATP-binding/permease protein CydD
SEQF5023|JADGME010000010.1
SEQF5023_00036
Genome Viewer
NA
AA
1743/581
36436-38178
putative ABC transporter ATP-binding/permease protein
SEQF5023|JADGME010000010.1
SEQF5023_00037
Genome Viewer
NA
AA
978/326
39156-38179
Hexaprenyl-diphosphate synthase large subunit ((2E%2C6E)-farnesyl-diphosphate specific)
SEQF5023|JADGME010000010.1
SEQF5023_00038
Genome Viewer
NA
AA
915/305
39244-40158
1%2C4-dihydroxy-2-naphthoate octaprenyltransferase
SEQF5023|JADGME010000010.1
SEQF5023_00039
Genome Viewer
NA
AA
1209/403
40174-41382
NADH dehydrogenase-like protein
SEQF5023|JADGME010000010.1
SEQF5023_00040
Genome Viewer
NA
AA
810/270
41575-42384
Lactate utilization protein A
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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